BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB019F04SP1|AL427502
(1040 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1474 1817 0.0
3x_Contig41 458 e-128
>3x_Contig1474
Length = 10584
Score = 1817 bits (913), Expect = 0.0
Identities = 978/996 (98%), Gaps = 6/996 (0%)
Strand = Plus / Minus
Query: 48 ggsaaagaacccataaggaggakcttggctccacttctttctctcctcttgtaacctctg 107
|| |||||||||||||||| || ||| ||||||||||||||||||||||||||||||||
Sbjct: 3313 ggcaaagaacccataaggatgatcttttctccacttctttctctcctcttgtaacctctg 3254
Query: 108 tagacaaagactactcatgrctgtttatattattcggccgttctgatcgtcgagtcgctt 167
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 3253 tagacaaagactactcatgactgtttatattattcggccgttctgatcgtcgagtcgctt 3194
Query: 168 taatatacagagaccgtaaatatattaaggtacgttgcgccctgttgtaaatagagcctt 227
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3193 taatatacagataccgtaaatatattaaggtacgttgcgccctgttgtaaatagagcctt 3134
Query: 228 aactcagatttaccgttgttgaataattggaggatatgatattccgtgcgatacgtcttt 287
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3133 aactcagatttaccgttgttgaataattggaggatatgatattccgtgcgatacgtcttt 3074
Query: 288 ttgtttgtgattttgaagatgattttgatattgtagaaaaagcatcaatagtgttttgaa 347
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3073 ttgtttgtgattttgaagatgattttgatattgtagaaaaagcatcaatagtgttttgaa 3014
Query: 348 gaaaaagtgatatttttcagaattgacagtgactaaagaaaccttaactagaggtataat 407
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 3013 gaaaaagtgatatttttcagaattgacagtgactaaagaaaccttaact-gaggtataat 2955
Query: 408 tmatagtaagggctacgcaccaccaaaatttcaacggatagtaatcagatacttcgacaa 467
| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2954 taatagtaagg-ctacgcaccaccaaaatttcaacggatagtaatcagatacttcgacaa 2896
Query: 468 acgatgtcagacaacaaagttgacgaatttgatgatttggatgactatttagaggatcca 527
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2895 acgatgtcagacaacaaagttgacgaatttgatgatttggatgactatttagaggatcca 2836
Query: 528 cgcaaactggatgaacaggaaaaacaagaaactgttccaaatgaggcagttactaagggt 587
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2835 cgcaaactggatgaacaggaaaaacaagaaactgttccaaatgaggcagttactaagggt 2776
Query: 588 gagcctgctacgc-gagcgatgatccagaagtagtcgagatgatggaagatttgcagaaa 646
|||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2775 gagcct-ctacgcagagcgatgatccagaagtagtcgagatgatggaagatttgcagaaa 2717
Query: 647 cagttccaacaattgatgcagcaggaaggcggtgatactgaccaagamatggttcagaat 706
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 2716 cagttccaacaattgatgcagcaggaaggcggtgatactgaccaagaaatggttcagaat 2657
Query: 707 ttcgagacattgctaactgtacttggagatgcatcgaaggagaaagaccataacagtgta 766
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2656 ttcgagacattgctaactgtacttggagatgcatcgaaggagaaagaccataacagtgta 2597
Query: 767 aaacacgttcaggagcaattgaagagcggtactggtttcaagaatatcatttccaacacc 826
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2596 aaacacgttcaggagcaattgaagagcggtactggtttcaagaatatcatttccaacacc 2537
Query: 827 ctagatagattganagaaaattctacgaaagtggatgaaagtttggaggaagagaagaaa 886
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2536 ctagatagattgaaagaaaattctacgaaagtggatgaaagtttggaggaagagaagaaa 2477
Query: 887 aatcagaactcagacgatattctttcccaattgctagatcaactagtggaaaacggcgat 946
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2476 aatcagaactcagacgatattctttcccaattgctagatcaactagtggaaaacggcgat 2417
Query: 947 ggcaacggtacgaacggagaaggaatggacaatgccattttg-aaatgctttcacaaatg 1005
|||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 2416 ggcaacggtacggacggagaaggaatggacaatgccattttgaaaatgctttcacaaatg 2357
Query: 1006 tcttctaaaraagt-ctatatcagccgatgaaacaa 1040
||||||||| |||| |||||||||||||||||||||
Sbjct: 2356 tcttctaaagaagtgctatatcagccgatgaaacaa 2321
>3x_Contig41
Length = 751
Score = 458 bits (230), Expect = e-128
Identities = 517/610 (84%), Gaps = 3/610 (0%)
Strand = Plus / Plus
Query: 210 tgttgtaaatagagccttaactcagatttaccgttgttgaataattggaggatatgatat 269
|||||||||||||| |||| | ||||||| ||||||||||||||||||||||||||||
Sbjct: 40 tgttgtaaatagagggttaagtgagatttagggttgttgaataattggaggatatgatat 99
Query: 270 tccgtgcgatacgtctttttgtttgtgattttgaagatgattttgatattgtagaaaaag 329
| ||| |||| || |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 100 tgggtgggataggtgtttttgtttgtgattttgaagatgattttgatattgtagaaaaag 159
Query: 330 catcaatagtgttttgaagaaaaagtgatatttttcagaattgacagtgactaaagaaac 389
|| ||||||||||||||||||||||||||||||| |||||||| ||||| ||||||||
Sbjct: 160 gatgaatagtgttttgaagaaaaagtgatatttttgagaattgagagtgagtaaagaaag 219
Query: 390 cttaactagaggtataattmatagtaagggctacgcaccaccaaaatttcaacggatagt 449
|||| | ||||||||||| |||||||||| || | | | ||||||| || |||||||
Sbjct: 220 gttaagt-gaggtataattaatagtaaggggta-ggaggaggaaaatttgaagggatagt 277
Query: 450 aatcagatacttcgacaaacgatgtcagacaacaaagttgacgaatttgatgatttggat 509
||| ||||| || || ||| ||||| ||| || |||||||| ||||||||||||||||||
Sbjct: 278 aatgagatagttggagaaaggatgtgagagaagaaagttgaggaatttgatgatttggat 337
Query: 510 gactatttagaggatccacgcaaactggatgaacaggaaaaacaagaaactgttccaaat 569
|| |||||||||||| | | ||| |||||||| |||||||| |||||| |||| ||||
Sbjct: 338 gagtatttagaggatggagggaaagtggatgaagaggaaaaagaagaaagtgttggaaat 397
Query: 570 gaggcagttactaagggtgagcctgcta-cgcgagcgatgatccagaagtagtcgagatg 628
|||| ||||| |||||||||| || || | ||| |||||| ||||||||| ||||||
Sbjct: 398 gagggagttagtaagggtgagggtggtagggagagggatgatggagaagtagtggagatg 457
Query: 629 atggaagatttgcagaaacagttccaacaattgatgcagcaggaaggcggtgatactgac 688
|||||||||||| ||||| |||| || |||||||| || ||||||| ||||||| |||
Sbjct: 458 atggaagatttggagaaagagttggaagaattgatggaggaggaagggggtgatagtgag 517
Query: 689 caagamatggttcagaatttcgagacattgctaactgtacttggagatgcatcgaaggag 748
|||| |||||| ||||||| |||| |||| ||| |||| ||||||||| || |||||||
Sbjct: 518 gaagaaatggttgagaatttggagagattggtaagtgtagttggagatggatggaaggag 577
Query: 749 aaagaccataacagtgtaaaacacgttcaggagcaattgaagagcggtactggtttcaag 808
||||| |||| ||||||||| | ||| ||||| |||||||||| |||| |||||| |||
Sbjct: 578 aaagaggataagagtgtaaaagaggttgaggaggaattgaagaggggtagtggtttgaag 637
Query: 809 aatatcattt 818
||||| ||||
Sbjct: 638 aatatgattt 647
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 8513
Number of Sequences: 1807
Number of extensions: 8513
Number of successful extensions: 80
Number of sequences better than 1.0e-20: 2
length of query: 1040
length of database: 10,358,551
effective HSP length: 16
effective length of query: 1024
effective length of database: 10,329,639
effective search space: 10577550336
effective search space used: 10577550336
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.4 bits)
S2: 50 (100.0 bits)